treedata.table: Manipulation of Matched Phylogenies and Data using 'data.table'

An implementation that combines trait data and a phylogenetic tree (or trees) into a single object of class treedata.table. The resulting object can be easily manipulated to simultaneously change the trait- and tree-level sampling. Currently implemented functions allow users to use a 'data.table' syntax when performing operations on the trait dataset within the treedata.table object.

Version: 0.1.0
Depends: R (≥ 2.10)
Imports: lazyeval, ape, geiger, utils, data.table
Suggests: knitr, rmarkdown, testthat
Published: 2020-09-30
DOI: 10.32614/CRAN.package.treedata.table
Author: Josef Uyeda ORCID iD [aut], Cristian Roman-Palacios ORCID iD [cre], April Wright ORCID iD [aut], Luke Harmon [ctb], Hugo Gruson [rev], Kari Norman [rev]
Maintainer: Cristian Roman-Palacios <cromanpa94 at>
License: MIT + file LICENSE
URL: (website)
NeedsCompilation: no
CRAN checks: treedata.table results


Reference manual: treedata.table.pdf
Vignettes: Getting Started With The treedata.table Package
Breve Introducción al Paquete treedata.table
Working With multiPhylo Objects in treedata.table
Partially Matching of Trait Data and Tree(s) in treedata.table
Additional Functions for Manipulating Data in treedata.table
Preprint: treedata.table


Package source: treedata.table_0.1.0.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): treedata.table_0.1.0.tgz, r-oldrel (arm64): treedata.table_0.1.0.tgz, r-release (x86_64): treedata.table_0.1.0.tgz, r-oldrel (x86_64): treedata.table_0.1.0.tgz


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