hsphase: Phasing, Pedigree Reconstruction, Sire Imputation and Recombination Events Identification of Half-sib Families Using SNP Data

Identification of recombination events, haplotype reconstruction, sire imputation and pedigree reconstruction using half-sib family SNP data.

Version: 2.0.3
Depends: snowfall, R (≥ 3.1.0)
Imports: Rcpp
LinkingTo: RcppArmadillo (≥ 0.4.300.8.0), Rcpp (≥ 0.11.2)
Published: 2024-02-16
DOI: 10.32614/CRAN.package.hsphase
Author: Mohammad Ferdosi, Cedric Gondro
Maintainer: Mohammad Ferdosi <mhferdosi at yahoo.com>
License: GPL-3
NeedsCompilation: yes
Citation: hsphase citation info
CRAN checks: hsphase results


Reference manual: hsphase.pdf
Vignettes: A brief vignette to illustrate the usage of the main functions of hsphase


Package source: hsphase_2.0.3.tar.gz
Windows binaries: r-devel: hsphase_2.0.3.zip, r-release: hsphase_2.0.3.zip, r-oldrel: hsphase_2.0.3.zip
macOS binaries: r-release (arm64): hsphase_2.0.3.tgz, r-oldrel (arm64): hsphase_2.0.3.tgz, r-release (x86_64): hsphase_2.0.3.tgz, r-oldrel (x86_64): hsphase_2.0.3.tgz
Old sources: hsphase archive

Reverse dependencies:

Reverse imports: hsrecombi


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