tcplfit2: Concentration-Response Modeling of HTS or Transcriptomics Data

Performs the basic concentration response curve fitting used in the 'tcpl' package. It is a substitute for the original tcplFit() function (and sub-functions) and allows a wider variety of concentration-response models. All of the models included in the 'BMDExpress' package are now part of this package, and the output includes a calculation of the bmd (Benchmark Dose or concentration) value.

Version: 0.1.3
Depends: R (≥ 3.5.0)
Imports: stats, future, methods, numDeriv, RColorBrewer, future.apply, stringr
Suggests: knitr, rmarkdown, stringi
Published: 2021-10-13
Author: Thomas Sheffield [aut], Richard Judson [ctb], Jason Brown [ctb, cre], Sarah E. Davidson [ctb]
Maintainer: Jason Brown <brown.jason at epa.gov>
License: MIT + file LICENSE
NeedsCompilation: no
Materials: README NEWS
CRAN checks: tcplfit2 results

Documentation:

Reference manual: tcplfit2.pdf
Vignettes: tcplfit2-vignette

Downloads:

Package source: tcplfit2_0.1.3.tar.gz
Windows binaries: r-devel: tcplfit2_0.1.3.zip, r-release: tcplfit2_0.1.3.zip, r-oldrel: tcplfit2_0.1.3.zip
macOS binaries: r-release (arm64): tcplfit2_0.1.2.tgz, r-release (x86_64): tcplfit2_0.1.3.tgz, r-oldrel: tcplfit2_0.1.3.tgz
Old sources: tcplfit2 archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=tcplfit2 to link to this page.