Currently available scGate vignettes:
A demo of the basic functionalities of scGate on scRNA-seq data - scGate basics
Purifying cells on multi-modal scATAC-seq + scRNA-seq data - scGate ATAC+RNA
Purifying cells on CITE-seq data - scGate CITE-seq
scGate to annotate scRNA-seq datasets integrated with Harmony and STACAS - scGate integrated
More information available at the scGate repository at on the related publication.