avotrex: A Global Dataset of Anthropogenic Extinct Birds and their Traits: Phylogeny Builder

Grafts the extinct bird species from the 'Avotrex' database (Sayol et al., in review) on to the 'BirdTree' phylogenies <https://birdtree.org>, using a set of different commands.

Version: 1.2.0
Depends: R (≥ 4.0.0)
Imports: ape, doParallel, doSNOW, dplyr, foreach, parallel, phytools, snow, stringr, tidytree (≥ 0.4.6), TreeTools, utils
Suggests: testthat, markdown, knitr, rmarkdown, covr
Published: 2024-06-08
DOI: 10.32614/CRAN.package.avotrex
Author: Joseph Wayman ORCID iD [aut, cre], Thomas J. Matthews ORCID iD [aut], Paul Dufour [ctb], Ferran Sayol [ctb], Pedro Cardoso [ctb]
Maintainer: Joseph Wayman <j.wayman at bham.ac.uk>
License: GPL-3
NeedsCompilation: no
Citation: avotrex citation info
Materials: README NEWS
CRAN checks: avotrex results

Documentation:

Reference manual: avotrex.pdf
Vignettes: avotrex R Package

Downloads:

Package source: avotrex_1.2.0.tar.gz
Windows binaries: r-devel: avotrex_1.2.0.zip, r-release: avotrex_1.1.0.zip, r-oldrel: avotrex_1.2.0.zip
macOS binaries: r-release (arm64): avotrex_1.2.0.tgz, r-oldrel (arm64): avotrex_1.2.0.tgz, r-release (x86_64): avotrex_1.2.0.tgz, r-oldrel (x86_64): avotrex_1.2.0.tgz
Old sources: avotrex archive

Linking:

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