AlphaPart: Partition/Decomposition of Breeding Values by Paths of Information

A software that implements a method for partitioning genetic trends to quantify the sources of genetic gain in breeding programmes. The partitioning method is described in Garcia-Cortes et al. (2008) <doi:10.1017/S175173110800205X>. The package includes the main function AlphaPart for partitioning breeding values and auxiliary functions for manipulating data and summarizing, visualizing, and saving results.

Version: 0.8.1
Imports: directlabels (≥ 1.1), gdata (≥ 2.6.0), ggplot2 (≥ 0.8.9), pedigree (≥ 1.3.1), Rcpp (≥ 0.9.4), reshape
LinkingTo: Rcpp
Suggests: RColorBrewer (≥ 1.0-2), truncnorm (≥ 1.0-5), knitr, rmarkdown, testthat
Published: 2020-03-25
Author: Gregor Gorjanc, Jana Obsteter
Maintainer: Jana Obšteter <jana.obsteter at kis.si>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: yes
Materials: README NEWS
CRAN checks: AlphaPart results

Downloads:

Reference manual: AlphaPart.pdf
Vignettes: AlphaPart
Package source: AlphaPart_0.8.1.tar.gz
Windows binaries: r-devel: AlphaPart_0.8.1.zip, r-devel-gcc8: AlphaPart_0.8.1.zip, r-release: AlphaPart_0.8.1.zip, r-oldrel: AlphaPart_0.8.1.zip
OS X binaries: r-release: AlphaPart_0.8.1.tgz, r-oldrel: AlphaPart_0.8.0.tgz
Old sources: AlphaPart archive

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