CRAN Package Check Results for Package genBaRcode

Last updated on 2021-09-18 03:50:55 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.2.4 9.37 283.61 292.98 OK
r-devel-linux-x86_64-debian-gcc 1.2.4 7.45 241.18 248.63 OK
r-devel-linux-x86_64-fedora-clang 1.2.4 347.53 NOTE
r-devel-linux-x86_64-fedora-gcc 1.2.4 378.81 OK
r-devel-windows-x86_64 1.2.4 13.00 344.00 357.00 OK
r-devel-windows-x86_64-gcc10-UCRT 1.2.4 OK
r-patched-linux-x86_64 1.2.4 9.51 292.62 302.13 OK
r-patched-solaris-x86 1.2.4 176.50 OK
r-release-linux-x86_64 1.2.4 7.77 291.58 299.35 OK
r-release-macos-arm64 1.2.4 OK
r-release-macos-x86_64 1.2.4 ERROR
r-release-windows-ix86+x86_64 1.2.4 22.00 255.00 277.00 OK
r-oldrel-macos-x86_64 1.2.4 ERROR
r-oldrel-windows-ix86+x86_64 1.2.4 23.00 277.00 300.00 ERROR

Check Details

Version: 1.2.4
Check: package dependencies
Result: NOTE
    Imports includes 22 non-default packages.
    Importing from so many packages makes the package vulnerable to any of
    them becoming unavailable. Move as many as possible to Suggests and
    use conditionally.
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.2.4
Check: package dependencies
Result: ERROR
    Package required but not available: ‘ggtree’
    
    See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
    manual.
Flavors: r-release-macos-x86_64, r-oldrel-macos-x86_64

Version: 1.2.4
Check: examples
Result: ERROR
    Running examples in 'genBaRcode-Ex.R' failed
    The error most likely occurred in:
    
    > ### Name: plotClusterGgTree
    > ### Title: Plotting a Cluster ggTree
    > ### Aliases: plotClusterGgTree
    >
    > ### ** Examples
    >
    > data(BC_dat)
    > plotClusterGgTree(BC_dat, tree_est = "UPGMA", type = "circular")
    Error in DataMask$new(.data, caller_env) :
     argument "caller_env" is missing, with no default
    Calls: plotClusterGgTree ... mutate.data.frame -> mutate_cols -> <Anonymous> -> initialize
    Execution halted
Flavor: r-oldrel-windows-ix86+x86_64

Version: 1.2.4
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building 'genBaRcode_GUI_Vignette.Rmd' using rmarkdown
    --- finished re-building 'genBaRcode_GUI_Vignette.Rmd'
    
    --- re-building 'genBaRcode_Vignette.Rmd' using rmarkdown
    Quitting from lines 692-696 (genBaRcode_Vignette.Rmd)
    Error: processing vignette 'genBaRcode_Vignette.Rmd' failed with diagnostics:
    argument "caller_env" is missing, with no default
    --- failed re-building 'genBaRcode_Vignette.Rmd'
    
    SUMMARY: processing the following file failed:
     'genBaRcode_Vignette.Rmd'
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-oldrel-windows-ix86+x86_64