CRAN Package Check Results for Package data.table

Last updated on 2020-07-16 03:46:32 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.12.8 39.91 543.28 583.19 ERROR
r-devel-linux-x86_64-debian-gcc 1.12.8 30.93 709.63 740.56 ERROR
r-devel-linux-x86_64-fedora-clang 1.12.8 541.11 ERROR
r-devel-linux-x86_64-fedora-gcc 1.12.8 672.58 ERROR
r-devel-windows-ix86+x86_64 1.12.8 128.00 753.00 881.00 ERROR
r-patched-linux-x86_64 1.12.8 34.65 633.62 668.27 ERROR
r-patched-solaris-x86 1.12.8 440.50 ERROR
r-release-linux-x86_64 1.12.8 34.06 625.55 659.61 ERROR
r-release-windows-ix86+x86_64 1.12.8 125.00 665.00 790.00 ERROR
r-oldrel-macos-x86_64 1.12.8 OK
r-oldrel-windows-ix86+x86_64 1.12.8 114.00 748.00 862.00 OK

Additional issues

clang-UBSAN

Check Details

Version: 1.12.8
Check: tests
Result: ERROR
     Running 'autoprint.R' [1s/1s]
     Comparing 'autoprint.Rout' to 'autoprint.Rout.save' ... OK
     Running 'froll.R' [87s/35s]
    Running R code in 'froll.R' had CPU time 2.5 times elapsed time
     Running 'knitr.R' [1s/1s]
     Comparing 'knitr.Rout' to 'knitr.Rout.save' ... OK
     Running 'main.R' [310s/144s]
     Running 'nafill.R' [4s/3s]
     Running 'other.R' [0s/1s]
     Running 'types.R' [1s/1s]
    Running the tests in 'tests/main.R' failed.
    Complete output:
     > require(data.table)
     Loading required package: data.table
     >
     > test.data.table() # runs the main test suite of 5,000+ tests in /inst/tests/tests.Rraw
     getDTthreads(verbose=TRUE):
     omp_get_num_procs() 32
     R_DATATABLE_NUM_PROCS_PERCENT unset (default 50)
     R_DATATABLE_NUM_THREADS unset
     omp_get_thread_limit() 3
     omp_get_max_threads() 3
     OMP_THREAD_LIMIT 3
     OMP_NUM_THREADS 3
     RestoreAfterFork true
     data.table is using 3 threads. See ?setDTthreads.
     test.data.table() running: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/tests/tests.Rraw.bz2
     Test 1390.3 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1390.4 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1390.5 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     S3 method lookup found 'as.Date.IDate' on search path
     S3 method lookup found 'as.Date.IDate' on search path
    
     10 longest running tests took 64s (45% of 141s)
     ID time nTest
     1: 1438 10.922 738
     2: 1650 8.325 91
     3: 1648 7.731 91
     4: 1652 7.477 91
     5: 1888 6.056 9
     6: 1642 5.239 91
     7: 1644 5.207 91
     8: 1646 4.583 91
     9: 1848 4.494 1
     10: 1912 4.097 2
    
     Error in test.data.table() :
     3 errors out of 8152 in 00:02:22 elapsed (00:04:50 cpu) on Tue Jul 14 23:04:23 2020. [endian==little, sizeof(long double)==16, sizeof(pointer)==8, TZ=Europe/Vienna, locale='LC_CTYPE=en_US.iso885915;LC_NUMERIC=C;LC_TIME=en_US.iso885915;LC_COLLATE=C;LC_MONETARY=en_US.iso885915;LC_MESSAGES=en_US.iso885915;LC_PAPER=en_US.iso885915;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_US.iso885915;LC_IDENTIFICATION=C', l10n_info()='MBCS=FALSE; UTF-8=FALSE; Latin-1=FALSE', getDTthreads()='omp_get_num_procs()==32; R_DATATABLE_NUM_PROCS_PERCENT==unset (default 50); R_DATATABLE_NUM_THREADS==unset; omp_get_thread_limit()==3; omp_get_max_threads()==3; OMP_THREAD_LIMIT==3; OMP_NUM_THREADS==3; RestoreAfterFork==true; data.table is using 3 threads. See ?setDTthreads.']. Search tests/tests.Rraw.bz2 for test numbers: 1390.3, 1390.4, 1390.5.
     In addition: Warning messages:
     1: In parse(n = -1, file = file, srcfile = NULL, keep.source = FALSE) :
     invalid input found on input connection '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/tests/tests.Rraw.bz2'
     2: In parse(n = -1, file = file, srcfile = NULL, keep.source = FALSE) :
     invalid input found on input connection '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/data.table/tests/tests.Rraw.bz2'
     Execution halted
Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.12.8
Check: tests
Result: ERROR
     Running ‘autoprint.R’ [0s/1s]
     Comparing ‘autoprint.Rout’ to ‘autoprint.Rout.save’ ... OK
     Running ‘froll.R’ [43s/67s]
     Running ‘knitr.R’ [1s/1s]
     Comparing ‘knitr.Rout’ to ‘knitr.Rout.save’ ... OK
     Running ‘main.R’ [536s/520s]
     Running ‘nafill.R’ [2s/4s]
     Running ‘other.R’ [0s/1s]
     Running ‘types.R’ [1s/2s]
    Running the tests in ‘tests/main.R’ failed.
    Complete output:
     > require(data.table)
     Loading required package: data.table
     >
     > test.data.table() # runs the main test suite of 5,000+ tests in /inst/tests/tests.Rraw
     getDTthreads(verbose=TRUE):
     omp_get_num_procs() 32
     R_DATATABLE_NUM_PROCS_PERCENT unset (default 50)
     R_DATATABLE_NUM_THREADS unset
     omp_get_thread_limit() 3
     omp_get_max_threads() 3
     OMP_THREAD_LIMIT 3
     OMP_NUM_THREADS 3
     RestoreAfterFork true
     data.table is using 3 threads. See ?setDTthreads.
     test.data.table() running: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/data.table/tests/tests.Rraw.bz2
     Test 1390.3 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1390.4 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1390.5 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1985.1 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1993.1 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
    
     10 longest running tests took 214s (41% of 518s)
     ID time nTest
     1: 1438 38.336 738
     2: 1652 29.657 91
     3: 1646 23.728 91
     4: 1912 23.647 2
     5: 1650 19.933 91
     6: 1648 17.408 91
     7: 1644 17.139 91
     8: 1252 15.778 484
     9: 1642 14.850 91
     10: 1223 14.389 728
    
     Error in test.data.table() :
     5 errors out of 9662 in 00:08:39 elapsed (00:08:51 cpu) on Wed Jul 15 20:55:46 2020. [endian==little, sizeof(long double)==16, sizeof(pointer)==8, TZ=Europe/Vienna, locale='LC_CTYPE=en_US.UTF-8;LC_NUMERIC=C;LC_TIME=en_US.UTF-8;LC_COLLATE=C;LC_MONETARY=en_US.UTF-8;LC_MESSAGES=en_US.UTF-8;LC_PAPER=en_US.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_US.UTF-8;LC_IDENTIFICATION=C', l10n_info()='MBCS=TRUE; UTF-8=TRUE; Latin-1=FALSE', getDTthreads()='omp_get_num_procs()==32; R_DATATABLE_NUM_PROCS_PERCENT==unset (default 50); R_DATATABLE_NUM_THREADS==unset; omp_get_thread_limit()==3; omp_get_max_threads()==3; OMP_THREAD_LIMIT==3; OMP_NUM_THREADS==3; RestoreAfterFork==true; data.table is using 3 threads. See ?setDTthreads.']. Search tests/tests.Rraw.bz2 for test numbers: 1390.3, 1390.4, 1390.5, 1985.1, 1993.1.
     Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.12.8
Check: tests
Result: ERROR
     Running ‘autoprint.R’
     Comparing ‘autoprint.Rout’ to ‘autoprint.Rout.save’ ... OK
     Running ‘froll.R’ [59s/159s]
     Running ‘knitr.R’
     Comparing ‘knitr.Rout’ to ‘knitr.Rout.save’ ... OK
     Running ‘main.R’ [262s/365s]
     Running ‘nafill.R’
     Running ‘other.R’
     Running ‘types.R’
    Running the tests in ‘tests/main.R’ failed.
    Complete output:
     > require(data.table)
     Loading required package: data.table
     >
     > test.data.table() # runs the main test suite of 5,000+ tests in /inst/tests/tests.Rraw
     getDTthreads(verbose=TRUE):
     omp_get_num_procs() 24
     R_DATATABLE_NUM_PROCS_PERCENT unset (default 50)
     R_DATATABLE_NUM_THREADS unset
     omp_get_thread_limit() 2
     omp_get_max_threads() 24
     OMP_THREAD_LIMIT 2
     OMP_NUM_THREADS unset
     RestoreAfterFork true
     data.table is using 2 threads. See ?setDTthreads.
     test.data.table() running: /data/gannet/ripley/R/packages/tests-clang/data.table.Rcheck/data.table/tests/tests.Rraw.bz2
     Test 1390.3 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1390.4 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1390.5 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1985.1 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1993.1 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
    
     10 longest running tests took 138s (38% of 361s)
     ID time nTest
     1: 1438 37.936 738
     2: 1223 16.275 728
     3: 1648 12.663 91
     4: 1437 11.781 36
     5: 1252 11.537 484
     6: 1642 10.725 91
     7: 1650 10.326 91
     8: 863 10.042 1
     9: 1652 8.755 91
     10: 894 8.557 360
    
     Error in test.data.table() :
     5 errors out of 9662 in 00:06:02 elapsed (00:04:08 cpu) on Wed Jul 15 06:29:44 2020. [endian==little, sizeof(long double)==16, sizeof(pointer)==8, TZ=Europe/London, locale='LC_CTYPE=en_GB.utf8;LC_NUMERIC=C;LC_TIME=en_GB.UTF-8;LC_COLLATE=C;LC_MONETARY=en_GB.UTF-8;LC_MESSAGES=en_GB.UTF-8;LC_PAPER=en_GB.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_GB.UTF-8;LC_IDENTIFICATION=C', l10n_info()='MBCS=TRUE; UTF-8=TRUE; Latin-1=FALSE', getDTthreads()='omp_get_num_procs()==24; R_DATATABLE_NUM_PROCS_PERCENT==unset (default 50); R_DATATABLE_NUM_THREADS==unset; omp_get_thread_limit()==2; omp_get_max_threads()==24; OMP_THREAD_LIMIT==2; OMP_NUM_THREADS==unset; RestoreAfterFork==true; data.table is using 2 threads. See ?setDTthreads.']. Search tests/tests.Rraw.bz2 for test numbers: 1390.3, 1390.4, 1390.5, 1985.1, 1993.1.
     Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.12.8
Check: tests
Result: ERROR
     Running ‘autoprint.R’
     Comparing ‘autoprint.Rout’ to ‘autoprint.Rout.save’ ... OK
     Running ‘froll.R’ [50s/170s]
     Running ‘knitr.R’
     Comparing ‘knitr.Rout’ to ‘knitr.Rout.save’ ... OK
     Running ‘main.R’ [394s/586s]
     Running ‘nafill.R’
     Running ‘other.R’
     Running ‘types.R’
    Running the tests in ‘tests/main.R’ failed.
    Complete output:
     > require(data.table)
     Loading required package: data.table
     >
     > test.data.table() # runs the main test suite of 5,000+ tests in /inst/tests/tests.Rraw
     getDTthreads(verbose=TRUE):
     omp_get_num_procs() 24
     R_DATATABLE_NUM_PROCS_PERCENT unset (default 50)
     R_DATATABLE_NUM_THREADS unset
     omp_get_thread_limit() 2
     omp_get_max_threads() 24
     OMP_THREAD_LIMIT 2
     OMP_NUM_THREADS unset
     RestoreAfterFork true
     data.table is using 2 threads. See ?setDTthreads.
     test.data.table() running: /data/gannet/ripley/R/packages/tests-devel/data.table.Rcheck/data.table/tests/tests.Rraw.bz2
     Test 1390.3 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1390.4 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1390.5 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1985.1 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1993.1 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
    
     10 longest running tests took 239s (41% of 583s)
     ID time nTest
     1: 863 45.195 1
     2: 1438 43.472 738
     3: 1223 41.277 728
     4: 1579 21.243 31
     5: 894 18.949 360
     6: 1252 18.182 484
     7: 1639 14.412 143
     8: 1650 12.620 91
     9: 1648 12.334 91
     10: 1652 12.057 91
    
     Error in test.data.table() :
     5 errors out of 9662 in 00:09:44 elapsed (00:06:29 cpu) on Wed Jul 15 06:34:33 2020. [endian==little, sizeof(long double)==16, sizeof(pointer)==8, TZ=Europe/London, locale='LC_CTYPE=en_GB.utf8;LC_NUMERIC=C;LC_TIME=en_GB.UTF-8;LC_COLLATE=C;LC_MONETARY=en_GB.UTF-8;LC_MESSAGES=en_GB.UTF-8;LC_PAPER=en_GB.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_GB.UTF-8;LC_IDENTIFICATION=C', l10n_info()='MBCS=TRUE; UTF-8=TRUE; Latin-1=FALSE', getDTthreads()='omp_get_num_procs()==24; R_DATATABLE_NUM_PROCS_PERCENT==unset (default 50); R_DATATABLE_NUM_THREADS==unset; omp_get_thread_limit()==2; omp_get_max_threads()==24; OMP_THREAD_LIMIT==2; OMP_NUM_THREADS==unset; RestoreAfterFork==true; data.table is using 2 threads. See ?setDTthreads.']. Search tests/tests.Rraw.bz2 for test numbers: 1390.3, 1390.4, 1390.5, 1985.1, 1993.1.
     Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 1.12.8
Check: running tests for arch ‘i386’
Result: ERROR
     Running 'autoprint.R' [1s]
     Comparing 'autoprint.Rout' to 'autoprint.Rout.save' ... OK
     Running 'froll.R' [29s]
     Running 'knitr.R' [1s]
     Comparing 'knitr.Rout' to 'knitr.Rout.save' ... OK
     Running 'main.R' [224s]
     Running 'nafill.R' [2s]
     Running 'other.R' [1s]
     Running 'types.R' [1s]
    Running the tests in 'tests/main.R' failed.
    Complete output:
     > require(data.table)
     Loading required package: data.table
     >
     > test.data.table() # runs the main test suite of 5,000+ tests in /inst/tests/tests.Rraw
     getDTthreads(verbose=TRUE):
     omp_get_num_procs() 32
     R_DATATABLE_NUM_PROCS_PERCENT unset (default 50)
     R_DATATABLE_NUM_THREADS unset
     omp_get_thread_limit() 2
     omp_get_max_threads() 32
     OMP_THREAD_LIMIT 2
     OMP_NUM_THREADS unset
     RestoreAfterFork true
     data.table is using 2 threads. See ?setDTthreads.
     test.data.table() running: D:/temp/Rtmp8GcHHJ/RLIBS_1dfec73535b47/data.table/tests/tests.Rraw.bz2
     Test 1390.3 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1390.4 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1390.5 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1590.04 ran without errors but failed check that x equals y:
     > x = base::order(c(x2, x1, x1, x2))
     First 4 of 4 (type 'integer'):
     [1] 1 2 3 4
     > y = INT(1, 4, 2, 3)
     First 4 of 4 (type 'integer'):
     [1] 1 4 2 3
     Mean relative difference: 0.4444444
     Test 1590.07 ran without errors but failed check that x equals y:
     > x = base::order(c(x2, x1, x1, x2))
     First 4 of 4 (type 'integer'):
     [1] 1 4 2 3
     > y = INT(2, 3, 1, 4)
     First 4 of 4 (type 'integer'):
     [1] 2 3 1 4
     Mean relative difference: 0.4
     Test 1985.1 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1993.1 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
    
     10 longest running tests took 69s (31% of 222s)
     ID time nTest
     1: 2028 7.87 2
     2: 901 7.30 2
     3: 1909 7.29 6
     4: 1658 7.16 61
     5: 1621 7.14 2
     6: 1555 7.00 13
     7: 900 6.98 2
     8: 1869 6.91 7
     9: 1449 6.82 2
     10: 1874 4.73 5
    
     Error in test.data.table() :
     7 errors out of 8276 in 00:03:42 elapsed (00:01:35 cpu) on Mon Jul 13 12:45:49 2020. [endian==little, sizeof(long double)==12, sizeof(pointer)==4, TZ=Europe/Berlin, locale='LC_COLLATE=C;LC_CTYPE=German_Germany.1252;LC_MONETARY=C;LC_NUMERIC=C;LC_TIME=C', l10n_info()='MBCS=FALSE; UTF-8=FALSE; Latin-1=TRUE; codepage=1252; system.codepage=1252', getDTthreads()='omp_get_num_procs()==32; R_DATATABLE_NUM_PROCS_PERCENT==unset (default 50); R_DATATABLE_NUM_THREADS==unset; omp_get_thread_limit()==2; omp_get_max_threads()==32; OMP_THREAD_LIMIT==2; OMP_NUM_THREADS==unset; RestoreAfterFork==true; data.table is using 2 threads. See ?setDTthreads.']. Search tests/tests.Rraw.bz2 for test numbers: 1390.3, 1390.4, 1390.5, 1590.04, 1590.07, 1985.1, 1993.1.
     Execution halted
Flavor: r-devel-windows-ix86+x86_64

Version: 1.12.8
Check: running tests for arch ‘x64’
Result: ERROR
     Running 'autoprint.R' [1s]
     Comparing 'autoprint.Rout' to 'autoprint.Rout.save' ... OK
     Running 'froll.R' [32s]
     Running 'knitr.R' [1s]
     Comparing 'knitr.Rout' to 'knitr.Rout.save' ... OK
     Running 'main.R' [265s]
     Running 'nafill.R' [3s]
     Running 'other.R' [1s]
     Running 'types.R' [1s]
    Running the tests in 'tests/main.R' failed.
    Complete output:
     > require(data.table)
     Loading required package: data.table
     >
     > test.data.table() # runs the main test suite of 5,000+ tests in /inst/tests/tests.Rraw
     getDTthreads(verbose=TRUE):
     omp_get_num_procs() 32
     R_DATATABLE_NUM_PROCS_PERCENT unset (default 50)
     R_DATATABLE_NUM_THREADS unset
     omp_get_thread_limit() 2
     omp_get_max_threads() 32
     OMP_THREAD_LIMIT 2
     OMP_NUM_THREADS unset
     RestoreAfterFork true
     data.table is using 2 threads. See ?setDTthreads.
     test.data.table() running: D:/temp/Rtmp8GcHHJ/RLIBS_1dfec73535b47/data.table/tests/tests.Rraw.bz2
     Test 1390.3 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1390.4 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1390.5 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1590.04 ran without errors but failed check that x equals y:
     > x = base::order(c(x2, x1, x1, x2))
     First 4 of 4 (type 'integer'):
     [1] 1 2 3 4
     > y = INT(1, 4, 2, 3)
     First 4 of 4 (type 'integer'):
     [1] 1 4 2 3
     Mean relative difference: 0.4444444
     Test 1590.07 ran without errors but failed check that x equals y:
     > x = base::order(c(x2, x1, x1, x2))
     First 4 of 4 (type 'integer'):
     [1] 1 4 2 3
     > y = INT(2, 3, 1, 4)
     First 4 of 4 (type 'integer'):
     [1] 2 3 1 4
     Mean relative difference: 0.4
     Test 1985.1 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1993.1 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
    
     10 longest running tests took 68s (26% of 263s)
     ID time nTest
     1: 1438 9.32 738
     2: 901 7.10 2
     3: 1648 6.99 91
     4: 1909 6.83 6
     5: 1650 6.75 91
     6: 900 6.54 2
     7: 1652 6.52 91
     8: 1869 6.46 7
     9: 1555 6.32 13
     10: 1449 6.13 2
    
     Error in test.data.table() :
     7 errors out of 9652 in 00:04:23 elapsed (00:02:16 cpu) on Mon Jul 13 12:50:53 2020. [endian==little, sizeof(long double)==16, sizeof(pointer)==8, TZ=Europe/Berlin, locale='LC_COLLATE=C;LC_CTYPE=German_Germany.1252;LC_MONETARY=C;LC_NUMERIC=C;LC_TIME=C', l10n_info()='MBCS=FALSE; UTF-8=FALSE; Latin-1=TRUE; codepage=1252; system.codepage=1252', getDTthreads()='omp_get_num_procs()==32; R_DATATABLE_NUM_PROCS_PERCENT==unset (default 50); R_DATATABLE_NUM_THREADS==unset; omp_get_thread_limit()==2; omp_get_max_threads()==32; OMP_THREAD_LIMIT==2; OMP_NUM_THREADS==unset; RestoreAfterFork==true; data.table is using 2 threads. See ?setDTthreads.']. Search tests/tests.Rraw.bz2 for test numbers: 1390.3, 1390.4, 1390.5, 1590.04, 1590.07, 1985.1, 1993.1.
     Execution halted
Flavor: r-devel-windows-ix86+x86_64

Version: 1.12.8
Check: tests
Result: ERROR
     Running ‘autoprint.R’ [1s/1s]
     Comparing ‘autoprint.Rout’ to ‘autoprint.Rout.save’ ... OK
     Running ‘froll.R’ [53s/63s]
     Running ‘knitr.R’ [1s/1s]
     Comparing ‘knitr.Rout’ to ‘knitr.Rout.save’ ... OK
     Running ‘main.R’ [442s/359s]
     Running ‘nafill.R’ [3s/3s]
     Running ‘other.R’ [0s/1s]
     Running ‘types.R’ [1s/1s]
    Running the tests in ‘tests/main.R’ failed.
    Complete output:
     > require(data.table)
     Loading required package: data.table
     >
     > test.data.table() # runs the main test suite of 5,000+ tests in /inst/tests/tests.Rraw
     getDTthreads(verbose=TRUE):
     omp_get_num_procs() 32
     R_DATATABLE_NUM_PROCS_PERCENT unset (default 50)
     R_DATATABLE_NUM_THREADS unset
     omp_get_thread_limit() 3
     omp_get_max_threads() 3
     OMP_THREAD_LIMIT 3
     OMP_NUM_THREADS 3
     RestoreAfterFork true
     data.table is using 3 threads. See ?setDTthreads.
     test.data.table() running: /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/data.table/tests/tests.Rraw.bz2
     Test 1390.3 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1390.4 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1390.5 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1985.1 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1993.1 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
    
     10 longest running tests took 177s (49% of 357s)
     ID time nTest
     1: 1648 26.414 91
     2: 1438 25.311 738
     3: 1650 23.292 91
     4: 1652 20.074 91
     5: 1223 18.257 728
     6: 1642 16.693 91
     7: 1644 13.419 91
     8: 1646 12.914 91
     9: 1912 11.587 2
     10: 1639 9.585 143
    
     Error in test.data.table() :
     5 errors out of 9662 in 00:05:57 elapsed (00:07:13 cpu) on Wed Jul 15 14:50:14 2020. [endian==little, sizeof(long double)==16, sizeof(pointer)==8, TZ=Europe/Vienna, locale='LC_CTYPE=en_US.UTF-8;LC_NUMERIC=C;LC_TIME=en_US.UTF-8;LC_COLLATE=C;LC_MONETARY=en_US.UTF-8;LC_MESSAGES=en_US.UTF-8;LC_PAPER=en_US.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_US.UTF-8;LC_IDENTIFICATION=C', l10n_info()='MBCS=TRUE; UTF-8=TRUE; Latin-1=FALSE', getDTthreads()='omp_get_num_procs()==32; R_DATATABLE_NUM_PROCS_PERCENT==unset (default 50); R_DATATABLE_NUM_THREADS==unset; omp_get_thread_limit()==3; omp_get_max_threads()==3; OMP_THREAD_LIMIT==3; OMP_NUM_THREADS==3; RestoreAfterFork==true; data.table is using 3 threads. See ?setDTthreads.']. Search tests/tests.Rraw.bz2 for test numbers: 1390.3, 1390.4, 1390.5, 1985.1, 1993.1.
     Execution halted
Flavor: r-patched-linux-x86_64

Version: 1.12.8
Check: tests
Result: ERROR
     Running ‘autoprint.R’
     Comparing ‘autoprint.Rout’ to ‘autoprint.Rout.save’ ... OK
     Running ‘froll.R’ [36s/42s]
     Running ‘knitr.R’
     Comparing ‘knitr.Rout’ to ‘knitr.Rout.save’ ... OK
     Running ‘main.R’ [60s/72s]
     Running ‘nafill.R’
     Running ‘other.R’
     Running ‘types.R’
    Running the tests in ‘tests/main.R’ failed.
    Complete output:
     > require(data.table)
     Loading required package: data.table
     >
     > test.data.table() # runs the main test suite of 5,000+ tests in /inst/tests/tests.Rraw
     getDTthreads(verbose=TRUE):
     omp_get_num_procs() 16
     R_DATATABLE_NUM_PROCS_PERCENT unset (default 50)
     R_DATATABLE_NUM_THREADS unset
     omp_get_thread_limit() 2
     omp_get_max_threads() 2
     OMP_THREAD_LIMIT 2
     OMP_NUM_THREADS unset
     RestoreAfterFork true
     data.table is using 2 threads. See ?setDTthreads.
     test.data.table() running: /home/ripley/R/Lib32/data.table/tests/tests.Rraw.bz2
     Test 1390.3 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1390.4 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1390.5 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1658.421 produced 1 errors but expected 0
     Expected:
     Observed: zlib 1.2.11 (zlib.h 1.2.11) deflate() returned error -2 with z_stream->msg=="" Z_FINISH=4 Z_BLOCK=5. Please include the full output above and below this message in your data.table bug report.
     Output captured before unexpected warning/error/message:
     omp_get_num_procs() 16
     R_DATATABLE_NUM_PROCS_PERCENT unset (default 50)
     R_DATATABLE_NUM_THREADS unset
     omp_get_thread_limit() 2
     omp_get_max_threads() 2
     OMP_THREAD_LIMIT 2
     OMP_NUM_THREADS unset
     RestoreAfterFork true
     data.table is using 2 threads. See ?setDTthreads.
     No list columns are present. Setting sep2='' otherwise quote='auto' would quote fields containing sep2.
     Column writers: 3 3
     args.doRowNames=0 args.rowNames=0 doQuote=-128 args.nrow=200 args.ncol=2 eolLen=1
     maxLineLen=51. Found in 0.000s
     Writing bom (false), yaml (0 characters) and column names (true) ... deflate input stream: ead3760 39 cdc6ef0 4
     deflate returned 1 with stream->total_out==24; Z_FINISH==4, Z_OK==0, Z_STREAM_END==1
     done in 0.000s
     Writing 200 rows in 1 batches of 200 rows (each buffer size 8MB, showProgress=0, nth=1)
     deflate input stream: f7dd160 8391193 efdd158 800
     deflate returned -2 with stream->total_out==0; Z_FINISH==4, Z_OK==0, Z_STREAM_END==1
     <simpleError in fwrite(DT, file = f1 <- tempfile(fileext = ".gz"), verbose = TRUE): zlib 1.2.11 (zlib.h 1.2.11) deflate() returned error -2 with z_stream->msg=="" Z_FINISH=4 Z_BLOCK=5. Please include the full output above and below this message in your data.table bug report.>
     Test 1658.43 ran without errors but failed check that x equals y:
     > x = fread(f1)
     Empty data.table (0 rows and 2 cols): a,b
     [Key= Types=log,log Classes=log,log]
     > y = DT
     a b [Key= Types=int,int Classes=int,int]
     1: 1 1
     2: 1 1
     ---
     199: 2 4
     200: 2 4
     Different number of rows
     Error in fwrite(DT, file = f3 <- tempfile(), compress = "gzip") :
     zlib 1.2.11 (zlib.h 1.2.11) deflate() returned error -2 with z_stream->msg=="" Z_FINISH=4 Z_BLOCK=5. Please retry fwrite() with verbose=TRUE and include the full output with your data.table bug report.
     Error in test.data.table() :
     Failed after test 1658.43 before the next test() call in /home/ripley/R/Lib32/data.table/tests/tests.Rraw.bz2
     Execution halted
Flavor: r-patched-solaris-x86

Version: 1.12.8
Check: tests
Result: ERROR
     Running ‘autoprint.R’ [1s/1s]
     Comparing ‘autoprint.Rout’ to ‘autoprint.Rout.save’ ... OK
     Running ‘froll.R’ [54s/64s]
     Running ‘knitr.R’ [1s/1s]
     Comparing ‘knitr.Rout’ to ‘knitr.Rout.save’ ... OK
     Running ‘main.R’ [430s/346s]
     Running ‘nafill.R’ [3s/3s]
     Running ‘other.R’ [0s/1s]
     Running ‘types.R’ [1s/1s]
    Running the tests in ‘tests/main.R’ failed.
    Complete output:
     > require(data.table)
     Loading required package: data.table
     >
     > test.data.table() # runs the main test suite of 5,000+ tests in /inst/tests/tests.Rraw
     getDTthreads(verbose=TRUE):
     omp_get_num_procs() 32
     R_DATATABLE_NUM_PROCS_PERCENT unset (default 50)
     R_DATATABLE_NUM_THREADS unset
     omp_get_thread_limit() 3
     omp_get_max_threads() 3
     OMP_THREAD_LIMIT 3
     OMP_NUM_THREADS 3
     RestoreAfterFork true
     data.table is using 3 threads. See ?setDTthreads.
     test.data.table() running: /home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/data.table/tests/tests.Rraw.bz2
     Test 1390.3 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1390.4 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1390.5 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1985.1 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1993.1 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
    
     10 longest running tests took 160s (46% of 344s)
     ID time nTest
     1: 1438 34.610 738
     2: 1648 18.806 91
     3: 1650 15.949 91
     4: 1652 15.765 91
     5: 1642 15.453 91
     6: 1912 14.383 2
     7: 1644 14.120 91
     8: 1646 11.577 91
     9: 1223 9.963 728
     10: 1252 9.798 484
    
     Error in test.data.table() :
     5 errors out of 9662 in 00:05:45 elapsed (00:07:03 cpu) on Tue Jul 14 06:51:05 2020. [endian==little, sizeof(long double)==16, sizeof(pointer)==8, TZ=Europe/Vienna, locale='LC_CTYPE=en_US.UTF-8;LC_NUMERIC=C;LC_TIME=en_US.UTF-8;LC_COLLATE=C;LC_MONETARY=en_US.UTF-8;LC_MESSAGES=en_US.UTF-8;LC_PAPER=en_US.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_US.UTF-8;LC_IDENTIFICATION=C', l10n_info()='MBCS=TRUE; UTF-8=TRUE; Latin-1=FALSE', getDTthreads()='omp_get_num_procs()==32; R_DATATABLE_NUM_PROCS_PERCENT==unset (default 50); R_DATATABLE_NUM_THREADS==unset; omp_get_thread_limit()==3; omp_get_max_threads()==3; OMP_THREAD_LIMIT==3; OMP_NUM_THREADS==3; RestoreAfterFork==true; data.table is using 3 threads. See ?setDTthreads.']. Search tests/tests.Rraw.bz2 for test numbers: 1390.3, 1390.4, 1390.5, 1985.1, 1993.1.
     Execution halted
Flavor: r-release-linux-x86_64

Version: 1.12.8
Check: running tests for arch ‘i386’
Result: ERROR
     Running 'autoprint.R' [1s]
     Comparing 'autoprint.Rout' to 'autoprint.Rout.save' ... OK
     Running 'froll.R' [22s]
     Running 'knitr.R' [1s]
     Comparing 'knitr.Rout' to 'knitr.Rout.save' ... OK
     Running 'main.R' [215s]
     Running 'nafill.R' [1s]
     Running 'other.R' [0s]
     Running 'types.R' [0s]
    Running the tests in 'tests/main.R' failed.
    Complete output:
     > require(data.table)
     Loading required package: data.table
     >
     > test.data.table() # runs the main test suite of 5,000+ tests in /inst/tests/tests.Rraw
     getDTthreads(verbose=TRUE):
     omp_get_num_procs() 32
     R_DATATABLE_NUM_PROCS_PERCENT unset (default 50)
     R_DATATABLE_NUM_THREADS unset
     omp_get_thread_limit() 2
     omp_get_max_threads() 32
     OMP_THREAD_LIMIT 2
     OMP_NUM_THREADS unset
     RestoreAfterFork true
     data.table is using 2 threads. See ?setDTthreads.
     test.data.table() running: D:/temp/RtmpSGcVT0/RLIBS_d44c5b6f3da0/data.table/tests/tests.Rraw.bz2
     Test 1390.3 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1390.4 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1390.5 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1985.1 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1993.1 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
    
     10 longest running tests took 68s (32% of 214s)
     ID time nTest
     1: 1869 7.95 7
     2: 1658 7.80 61
     3: 901 7.35 2
     4: 900 7.25 2
     5: 1909 6.96 6
     6: 1555 6.84 13
     7: 1621 6.68 2
     8: 1449 6.66 2
     9: 2028 6.60 2
     10: 1681 4.47 1
    
     Error in test.data.table() :
     5 errors out of 8276 in 00:03:34 elapsed (00:01:25 cpu) on Sat Jul 11 00:27:18 2020. [endian==little, sizeof(long double)==12, sizeof(pointer)==4, TZ=Europe/Berlin, locale='LC_COLLATE=C;LC_CTYPE=German_Germany.1252;LC_MONETARY=C;LC_NUMERIC=C;LC_TIME=C', l10n_info()='MBCS=FALSE; UTF-8=FALSE; Latin-1=TRUE; codepage=1252; system.codepage=1252', getDTthreads()='omp_get_num_procs()==32; R_DATATABLE_NUM_PROCS_PERCENT==unset (default 50); R_DATATABLE_NUM_THREADS==unset; omp_get_thread_limit()==2; omp_get_max_threads()==32; OMP_THREAD_LIMIT==2; OMP_NUM_THREADS==unset; RestoreAfterFork==true; data.table is using 2 threads. See ?setDTthreads.']. Search tests/tests.Rraw.bz2 for test numbers: 1390.3, 1390.4, 1390.5, 1985.1, 1993.1.
     Execution halted
Flavor: r-release-windows-ix86+x86_64

Version: 1.12.8
Check: running tests for arch ‘x64’
Result: ERROR
     Running 'autoprint.R' [0s]
     Comparing 'autoprint.Rout' to 'autoprint.Rout.save' ... OK
     Running 'froll.R' [23s]
     Running 'knitr.R' [1s]
     Comparing 'knitr.Rout' to 'knitr.Rout.save' ... OK
     Running 'main.R' [240s]
     Running 'nafill.R' [2s]
     Running 'other.R' [0s]
     Running 'types.R' [1s]
    Running the tests in 'tests/main.R' failed.
    Complete output:
     > require(data.table)
     Loading required package: data.table
     >
     > test.data.table() # runs the main test suite of 5,000+ tests in /inst/tests/tests.Rraw
     getDTthreads(verbose=TRUE):
     omp_get_num_procs() 32
     R_DATATABLE_NUM_PROCS_PERCENT unset (default 50)
     R_DATATABLE_NUM_THREADS unset
     omp_get_thread_limit() 2
     omp_get_max_threads() 32
     OMP_THREAD_LIMIT 2
     OMP_NUM_THREADS unset
     RestoreAfterFork true
     data.table is using 2 threads. See ?setDTthreads.
     test.data.table() running: D:/temp/RtmpSGcVT0/RLIBS_d44c5b6f3da0/data.table/tests/tests.Rraw.bz2
     Test 1390.3 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1390.4 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1390.5 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1985.1 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
     Test 1993.1 produced 1 errors but expected 0
     Expected:
     Observed: 'origin' must be supplied
    
     10 longest running tests took 66s (27% of 239s)
     ID time nTest
     1: 1869 7.67 7
     2: 1555 7.19 13
     3: 1438 6.74 738
     4: 2028 6.68 2
     5: 1621 6.56 2
     6: 1449 6.55 2
     7: 1658 6.44 61
     8: 901 6.40 2
     9: 1909 6.32 6
     10: 900 6.13 2
    
     Error in test.data.table() :
     5 errors out of 9652 in 00:03:59 elapsed (00:01:47 cpu) on Sat Jul 11 00:31:47 2020. [endian==little, sizeof(long double)==16, sizeof(pointer)==8, TZ=Europe/Berlin, locale='LC_COLLATE=C;LC_CTYPE=German_Germany.1252;LC_MONETARY=C;LC_NUMERIC=C;LC_TIME=C', l10n_info()='MBCS=FALSE; UTF-8=FALSE; Latin-1=TRUE; codepage=1252; system.codepage=1252', getDTthreads()='omp_get_num_procs()==32; R_DATATABLE_NUM_PROCS_PERCENT==unset (default 50); R_DATATABLE_NUM_THREADS==unset; omp_get_thread_limit()==2; omp_get_max_threads()==32; OMP_THREAD_LIMIT==2; OMP_NUM_THREADS==unset; RestoreAfterFork==true; data.table is using 2 threads. See ?setDTthreads.']. Search tests/tests.Rraw.bz2 for test numbers: 1390.3, 1390.4, 1390.5, 1985.1, 1993.1.
     Execution halted
Flavor: r-release-windows-ix86+x86_64