CRAN Package Check Results for Package PhenotypeSimulator

Last updated on 2024-02-28 16:50:42 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.3.4 33.51 281.81 315.32 NOTE
r-devel-linux-x86_64-debian-gcc 0.3.4 26.04 209.32 235.36 NOTE
r-devel-linux-x86_64-fedora-clang 0.3.4 391.35 NOTE
r-devel-linux-x86_64-fedora-gcc 0.3.4 386.01 NOTE
r-devel-windows-x86_64 0.3.4 28.00 317.00 345.00 NOTE
r-patched-linux-x86_64 0.3.4 29.01 252.58 281.59 ERROR
r-release-linux-x86_64 0.3.4 22.61 267.53 290.14 NOTE
r-release-macos-arm64 0.3.4 9.00 ERROR
r-release-macos-x86_64 0.3.4 195.00 NOTE
r-release-windows-x86_64 0.3.4 39.00 352.00 391.00 NOTE
r-oldrel-macos-arm64 0.3.4 108.00 NOTE
r-oldrel-windows-x86_64 0.3.4 38.00 343.00 381.00 NOTE

Check Details

Version: 0.3.4
Check: C++ specification
Result: NOTE Specified C++11: please drop specification unless essential Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-x86_64, r-release-windows-x86_64

Version: 0.3.4
Check: installed package size
Result: NOTE installed size is 5.1Mb sub-directories of 1Mb or more: doc 1.5Mb extdata 3.2Mb Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-x86_64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-windows-x86_64

Version: 0.3.4
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘PhenotypeSimulator.Rmd’ using rmarkdown --- finished re-building ‘PhenotypeSimulator.Rmd’ --- re-building ‘Simulation-and-LinearModel.Rmd’ using rmarkdown Could not fetch http://www.zotero.org/styles/plos HttpExceptionRequest Request { host = "www.zotero.org" port = 80 secure = False requestHeaders = [] path = "/styles/plos" queryString = "" method = "GET" proxy = Nothing rawBody = False redirectCount = 10 responseTimeout = ResponseTimeoutDefault requestVersion = HTTP/1.1 proxySecureMode = ProxySecureWithConnect } (InternalException (HandshakeFailed (Error_Protocol "peer does not support Extended Main Secret" HandshakeFailure))) Error: processing vignette 'Simulation-and-LinearModel.Rmd' failed with diagnostics: pandoc document conversion failed with error 61 --- failed re-building ‘Simulation-and-LinearModel.Rmd’ --- re-building ‘SimulationBasedOnExampleData.Rmd’ using rmarkdown Could not fetch http://www.zotero.org/styles/plos HttpExceptionRequest Request { host = "www.zotero.org" port = 80 secure = False requestHeaders = [] path = "/styles/plos" queryString = "" method = "GET" proxy = Nothing rawBody = False redirectCount = 10 responseTimeout = ResponseTimeoutDefault requestVersion = HTTP/1.1 proxySecureMode = ProxySecureWithConnect } (InternalException (HandshakeFailed (Error_Protocol "peer does not support Extended Main Secret" HandshakeFailure))) Error: processing vignette 'SimulationBasedOnExampleData.Rmd' failed with diagnostics: pandoc document conversion failed with error 61 --- failed re-building ‘SimulationBasedOnExampleData.Rmd’ --- re-building ‘sample-scripts-external-genotype-simulation.Rmd’ using rmarkdown Could not fetch http://www.zotero.org/styles/plos HttpExceptionRequest Request { host = "www.zotero.org" port = 80 secure = False requestHeaders = [] path = "/styles/plos" queryString = "" method = "GET" proxy = Nothing rawBody = False redirectCount = 10 responseTimeout = ResponseTimeoutDefault requestVersion = HTTP/1.1 proxySecureMode = ProxySecureWithConnect } (InternalException (HandshakeFailed (Error_Protocol "peer does not support Extended Main Secret" HandshakeFailure))) Error: processing vignette 'sample-scripts-external-genotype-simulation.Rmd' failed with diagnostics: pandoc document conversion failed with error 61 --- failed re-building ‘sample-scripts-external-genotype-simulation.Rmd’ SUMMARY: processing the following files failed: ‘Simulation-and-LinearModel.Rmd’ ‘SimulationBasedOnExampleData.Rmd’ ‘sample-scripts-external-genotype-simulation.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-patched-linux-x86_64

Version: 0.3.4
Check: package dependencies
Result: ERROR Package required but not available: ‘snpStats’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavor: r-release-macos-arm64