CRAN Package Check Results for Package PCMBase

Last updated on 2020-08-10 06:47:36 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.2.11 27.08 222.11 249.19 OK
r-devel-linux-x86_64-debian-gcc 1.2.11 22.05 161.85 183.90 OK
r-devel-linux-x86_64-fedora-clang 1.2.11 293.37 OK
r-devel-linux-x86_64-fedora-gcc 1.2.11 285.70 OK
r-devel-windows-ix86+x86_64 1.2.11 45.00 280.00 325.00 OK
r-patched-linux-x86_64 1.2.11 24.07 212.94 237.01 OK
r-patched-solaris-x86 1.2.11 381.30 OK
r-release-linux-x86_64 1.2.11 22.93 214.55 237.48 OK
r-release-macos-x86_64 1.2.11 WARN
r-release-windows-ix86+x86_64 1.2.11 60.00 285.00 345.00 OK
r-oldrel-macos-x86_64 1.2.11 OK
r-oldrel-windows-ix86+x86_64 1.2.11 38.00 190.00 228.00 OK

Check Details

Version: 1.2.11
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘ggtree’
Flavor: r-release-macos-x86_64

Version: 1.2.11
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘PCMBase.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Failed with error: 'there is no package called 'ggtree''
    Quitting from lines 37-53 (PCMBase.Rmd)
    Error: processing vignette 'PCMBase.Rmd' failed with diagnostics:
    argument is not interpretable as logical
    --- failed re-building ‘PCMBase.Rmd’
    
    --- re-building ‘PCMCreateModel.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Failed with error: 'there is no package called 'ggtree''
    Quitting from lines 37-54 (PCMCreateModel.Rmd)
    Error: processing vignette 'PCMCreateModel.Rmd' failed with diagnostics:
    argument is not interpretable as logical
    --- failed re-building ‘PCMCreateModel.Rmd’
    
    --- re-building ‘PCMParam.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    --- finished re-building ‘PCMParam.Rmd’
    
    --- re-building ‘PCMTracePruning.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Failed with error: 'there is no package called 'ggtree''
    Quitting from lines 37-59 (PCMTracePruning.Rmd)
    Error: processing vignette 'PCMTracePruning.Rmd' failed with diagnostics:
    argument is not interpretable as logical
    --- failed re-building ‘PCMTracePruning.Rmd’
    
    SUMMARY: processing the following files failed:
     ‘PCMBase.Rmd’ ‘PCMCreateModel.Rmd’ ‘PCMTracePruning.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-release-macos-x86_64